EnrichmentMap
docs/2.2
User Guide
Installing
Quick Start Guide
File Formats
Tips on Parameter Choice
Interfaces
Attributes
Additional Features
EnrichmentMap Gene Sets
Tutorials
GSEA Tutorial
GSEA Tutorial - GSEA Interface
DAVID Tutorial
Generic Tutorial
BiNGO Tutorial
g:Profiler Tutorial
GREAT Tutorial
Post Analysis Tutorial
collapse_ExpressionMatrix.py
Links
Baderlab.org
Baderlab genesets collections
Cytoscape.org
Cytoscape App Store
GitHub
EnrichmentMap
Docs
»
Tutorials
Edit on GitHub
Tutorials
ΒΆ
GSEA Tutorial
Files
Step 1: Generate GSEA output files
Step 2: Generate Enrichment Map with GSEA Output
Step 3: Examining Results
More Tutorials
GSEA Tutorial - GSEA Interface
Files
Step 1: Generate GSEA output files
Step 2: Generate Enrichment Map
Step 3: Examining Results
More Tutorials
DAVID Tutorial
Files
Step 1: Generate DAVID output files
Step 2: Generate Enrichment Map with DAVID Output
Step 3: Examining Results
Generic Tutorial
Files
BiNGO Tutorial
Files
Step 1: Generate BiNGO output files
Step 2: Generate Enrichment Map with BiNGO Output
Step 3: Examining Results
g:Profiler Tutorial
Files
Step 1: Generate g:Profiler output files
Step 2: Generate Enrichment Map with g:Profiler Output
Step 3: Examining Results
GREAT Tutorial
Files
Step 1: Generate GREAT output files
Step 1B (Optional): Generate Gene to region association file
Step 2: Generate Enrichment Map with GREAT Output
Step 3: Filtering GREAT results
Step 4: Examining Results
Post Analysis Tutorial
Outline
Instructions
Examining Results
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