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3.5.0

User Guide:

  • Installation
  • What’s New
  • Quick Start
  • Creating a Network
  • Creating a Network from a GMT file
  • Network Visualization
  • Columns
  • Main Panel
  • Finding Clusters with AutoAnnotate
  • Heat Map Panel
  • Legend Dialog
  • Post Analysis (Add Signature Gene Sets)
  • Creating Networks in Other Apps
  • Creating Networks from Other Apps
  • GSEA Integration
  • File Formats
  • Tips on Parameter Choice
  • EnrichmentMap Protocol
  • Download Gene Set Files
  • Automating EnrichmentMap
  • Properties
  • collapse_ExpressionMatrix.py

Links:

  • Cytoscape.org
  • Cytoscape App Store
  • Baderlab.org
  • GitHub
EnrichmentMap
  • Search

© Copyright 2018, Ruth Isserlin, Mike Kucera, Christian Lopes.

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